Index

_

_Samsara__first_step() (proxtoolbox.algorithms.samsara.samsara.Samsara method) _Samsara__next_step() (proxtoolbox.algorithms.samsara.samsara.Samsara method) _Samsara__prepare_step() (proxtoolbox.algorithms.samsara.samsara.Samsara method)

_Samsara__set_methods() (proxtoolbox.algorithms.samsara.samsara.Samsara method) _Samsara__update_step() (proxtoolbox.algorithms.samsara.samsara.Samsara method) _Samsara__validate_options() (proxtoolbox.algorithms.samsara.samsara.Samsara method)

A

ADMM (class in proxtoolbox.algorithms.ADMM) ADMM_Context (class in proxtoolbox.proxoperators.ADMM_prox) ADMM_IterateMonitor (class in proxtoolbox.algorithms.ADMM_IterateMonitor) ADMM_phase_indicator_objective (class in proxtoolbox.algorithms.ADMM_phase_indicator_objective) ADMM_PhaseLagrangeUpdate (class in proxtoolbox.algorithms.ADMM_PhaseLagrangeUpdate) Algorithm (class in proxtoolbox.algorithms.algorithm) animate() (proxtoolbox.experiments.CT.ART_Experiment.ART_Experiment method) (proxtoolbox.experiments.experiment.Experiment method) (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method)

animateFigure() (proxtoolbox.experiments.experiment.Experiment method) AP (class in proxtoolbox.algorithms.AP) Approx_P_M (class in proxtoolbox.proxoperators.P_M) Approx_P_M_masked (class in proxtoolbox.proxoperators.P_M) Approx_Pphase_FreFra_ADMM_Poisson (class in proxtoolbox.proxoperators.ADMM_prox) Approx_Pphase_FreFra_Poisson (class in proxtoolbox.proxoperators.Approx_Pphase_FreFra_Poisson) ART_Experiment (class in proxtoolbox.experiments.CT.ART_Experiment) AvP (class in proxtoolbox.algorithms.AvP) AvP2 (class in proxtoolbox.algorithms.AvP2) AvP2_IterateMonitor (class in proxtoolbox.algorithms.AvP2_IterateMonitor)

B

BFGS1_product() (in module proxtoolbox.algorithms.samsara.hessian) bin_array() (in module proxtoolbox.utils.OrbitalTomog.binning)

Broyden1_product() (in module proxtoolbox.algorithms.samsara.hessian) Broyden2_product() (in module proxtoolbox.algorithms.samsara.hessian)

C

CADRl (class in proxtoolbox.algorithms.CADRl) calculateObjective() (proxtoolbox.algorithms.ADMM_phase_indicator_objective.ADMM_phase_indicator_objective method) (proxtoolbox.algorithms.AvP2_IterateMonitor.AvP2_IterateMonitor method) (proxtoolbox.algorithms.PHeBIE_IterateMonitor.PHeBIE_IterateMonitor method) (proxtoolbox.algorithms.iterateMonitor.IterateMonitor method) CDI_Experiment (class in proxtoolbox.experiments.phase.CDI_Experiment) CDP_Experiment (class in proxtoolbox.experiments.phase.CDP_Experiment) CDRl (class in proxtoolbox.algorithms.CDRl) cdSY_mat() (in module proxtoolbox.algorithms.samsara.history) Cell (class in proxtoolbox.utils.cell) circ() (in module proxtoolbox.experiments.ptychography.ptychographyUtils) complex_to_hsv() (in module proxtoolbox.utils.visualization.complex_field_visualization) complex_to_rgb() (in module proxtoolbox.utils.visualization.complex_field_visualization)

computeRelaxation() (proxtoolbox.algorithms.algorithm.Algorithm method) CP (class in proxtoolbox.algorithms.CP) createBenchmark() (proxtoolbox.experiments.experiment.Experiment method) createFourGraphFigure() (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method) createFourImageFigure() (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method) createGraphSubFigure() (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method) createImageSubFigure() (proxtoolbox.experiments.CT.ART_Experiment.ART_Experiment method) (proxtoolbox.experiments.phase.Krueger_Experiment.Krueger_Experiment method) (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method) createTestImage() (proxtoolbox.experiments.phase.CDP_Experiment.CDP_Experiment method) createTwoGraphFigure() (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method) createTwoImageFigure() (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method) CT_IterateMonitor (class in proxtoolbox.algorithms.CT_IterateMonitor) CT_ProxOperator (class in proxtoolbox.proxoperators.CT_prox)

D

default() (proxtoolbox.experiments.experiment.JSONNumpyEncoder method) delta_invBFGS() (in module proxtoolbox.algorithms.samsara.hessian) delta_MSB2() (in module proxtoolbox.algorithms.samsara.hessian) dftregistration() (in module proxtoolbox.utils.dftregistration) dftups() (in module proxtoolbox.utils.dftregistration) displayProgress() (proxtoolbox.algorithms.algorithm.Algorithm method) (proxtoolbox.algorithms.iterateMonitor.IterateMonitor method)

dlProgress() (in module proxtoolbox.utils.GetData) (in module proxtoolbox.utils.GetData.GetData) Dogleg_QN() (in module proxtoolbox.algorithms.samsara.step_finder) DRAP (class in proxtoolbox.algorithms.DRAP) DRl (class in proxtoolbox.algorithms.DRl) DyRePr (class in proxtoolbox.algorithms.DyRePr)

E

ellipsis() (in module proxtoolbox.experiments.ptychography.ptychographyUtils) estimateGap() (proxtoolbox.experiments.experiment.Experiment method) eval() (proxtoolbox.algorithms.ADMM_PhaseLagrangeUpdate.ADMM_PhaseLagrangeUpdate method) (proxtoolbox.proxoperators.ADMM_prox.Approx_Pphase_FreFra_ADMM_Poisson method) (proxtoolbox.proxoperators.ADMM_prox.Prox_primal_ADMM_indicator method) (proxtoolbox.proxoperators.Approx_Pphase_FreFra_Poisson.Approx_Pphase_FreFra_Poisson method) (proxtoolbox.proxoperators.CT_prox.P_hyperplane method) (proxtoolbox.proxoperators.CT_prox.P_sequential_hyperplane_even method) (proxtoolbox.proxoperators.CT_prox.P_sequential_hyperplane_odd method) (proxtoolbox.proxoperators.P_Amod.P_Amod method) (proxtoolbox.proxoperators.P_CDP.P_CDP method) (proxtoolbox.proxoperators.P_M.Approx_P_M method) (proxtoolbox.proxoperators.P_M.Approx_P_M_masked method) (proxtoolbox.proxoperators.P_M.P_M method) (proxtoolbox.proxoperators.P_M.P_M_masked method) (proxtoolbox.proxoperators.P_SP.P_SP method) (proxtoolbox.proxoperators.P_Sparsity.P_Sparsity method) (proxtoolbox.proxoperators.P_Sparsity.P_Sparsity_Superpixel method) (proxtoolbox.proxoperators.P_Sparsity.P_Sparsity_Superpixel_real method) (proxtoolbox.proxoperators.P_Sparsity.P_Sparsity_Symmetric method) (proxtoolbox.proxoperators.P_Sparsity.P_Sparsity_Symmetric_real method) (proxtoolbox.proxoperators.P_Sparsity.P_Sparsity_real method) (proxtoolbox.proxoperators.P_amp_support.P_amp_support method) (proxtoolbox.proxoperators.P_avg.P_avg method) (proxtoolbox.proxoperators.P_diag.P_diag method) (proxtoolbox.proxoperators.Prox_product_space.Prox_product_space method) (proxtoolbox.proxoperators.propagators.InvPropagatorFFT2 method) (proxtoolbox.proxoperators.propagators.InvPropagatorFFTn method) (proxtoolbox.proxoperators.propagators.InvPropagator_FreFra method) (proxtoolbox.proxoperators.propagators.PropagatorFFTn method) (proxtoolbox.proxoperators.propagators.Propagator_FreFra method) (proxtoolbox.proxoperators.proxoperator.ProxOperator method) (proxtoolbox.proxoperators.ptychographyProx.Explicit_ptychography_image method) (proxtoolbox.proxoperators.ptychographyProx.Explicit_ptychography_scan_farfield_object_ptwise method) (proxtoolbox.proxoperators.ptychographyProx.Explicit_ptychography_scan_farfield_probe_ptwise method) (proxtoolbox.proxoperators.ptychographyProx.P_ptychography_scan_farfield_probe method) (proxtoolbox.proxoperators.ptychographyProx.P_supp_amp_band method) (proxtoolbox.proxoperators.ptychographyProx.Prox_ptychography_product_space method) (proxtoolbox.proxoperators.ptychographyProx.Prox_ptychography_ptwise_diag method) (proxtoolbox.proxoperators.sudokuProx.ProjColumn method) (proxtoolbox.proxoperators.sudokuProx.ProjGiven method) (proxtoolbox.proxoperators.sudokuProx.ProjRow method) (proxtoolbox.proxoperators.sudokuProx.ProjSquare method)

eval_helper() (proxtoolbox.proxoperators.ADMM_prox.Approx_Pphase_FreFra_ADMM_Poisson method) evaluate() (proxtoolbox.algorithms.ADMM.ADMM method) (proxtoolbox.algorithms.AP.AP method) (proxtoolbox.algorithms.AvP.AvP method) (proxtoolbox.algorithms.AvP2.AvP2 method) (proxtoolbox.algorithms.CADRl.CADRl method) (proxtoolbox.algorithms.CDRl.CDRl method) (proxtoolbox.algorithms.CP.CP method) (proxtoolbox.algorithms.DRAP.DRAP method) (proxtoolbox.algorithms.DyRePr.DyRePr method) (proxtoolbox.algorithms.GenericAccelerator.GenericAccelerator method) (proxtoolbox.algorithms.HPR.HPR method) (proxtoolbox.algorithms.PHeBIE.PHeBIE method) (proxtoolbox.algorithms.QNAccelerator.QNAccelerator method) (proxtoolbox.algorithms.QNAvP.QNAvP method) (proxtoolbox.algorithms.RAAR.RAAR method) (proxtoolbox.algorithms.algorithm.Algorithm method) evaluateChange() (proxtoolbox.algorithms.iterateMonitor.IterateMonitor method) Experiment (class in proxtoolbox.experiments.experiment) ExperimentMetaClass (class in proxtoolbox.experiments.experiment) Explicit_ptychography_image (class in proxtoolbox.proxoperators.ptychographyProx) Explicit_ptychography_scan_farfield_object_ptwise (class in proxtoolbox.proxoperators.ptychographyProx) Explicit_ptychography_scan_farfield_probe_ptwise (class in proxtoolbox.proxoperators.ptychographyProx) Explicit_TR() (in module proxtoolbox.algorithms.samsara.step_finder) ExplicitPtychographyProxOperator (class in proxtoolbox.proxoperators.ptychographyProx) Extracter() (in module proxtoolbox.utils.Extracter)

F

fdSY_mat() (in module proxtoolbox.algorithms.samsara.history) FeasibilityIterateMonitor (class in proxtoolbox.algorithms.feasibilityIterateMonitor) FFT() (in module proxtoolbox.utils) (in module proxtoolbox.utils.FFT)

fft() (in module proxtoolbox.utils.FFT) find() (in module proxtoolbox.utils.Extracter) (in module proxtoolbox.utils.Unwrapper) Flip() (in module proxtoolbox.utils.Flip) fourier_interpolate() (in module proxtoolbox.utils.OrbitalTomog.interpolation)

G

gaussian() (in module proxtoolbox.utils.gaussian) GenericAccelerator (class in proxtoolbox.algorithms.GenericAccelerator) getData() (in module proxtoolbox.utils.GetData) (in module proxtoolbox.utils.GetData.GetData) getDefaultParameters() (proxtoolbox.experiments.CT.ART_Experiment.ART_Experiment static method) (proxtoolbox.experiments.experiment.Experiment static method) (proxtoolbox.experiments.phase.CDI_Experiment.CDI_Experiment static method) (proxtoolbox.experiments.phase.CDP_Experiment.CDP_Experiment static method) (proxtoolbox.experiments.phase.JWST_Experiment.JWST_Experiment static method) (proxtoolbox.experiments.phase.Krueger_Experiment.Krueger_Experiment static method) (proxtoolbox.experiments.sudoku.sudokuExperiment.SudokuExperiment static method)

getDescription() (proxtoolbox.algorithms.ADMM.ADMM method) (proxtoolbox.algorithms.CADRl.CADRl method) (proxtoolbox.algorithms.CDRl.CDRl method) (proxtoolbox.algorithms.DRAP.DRAP method) (proxtoolbox.algorithms.HPR.HPR method) (proxtoolbox.algorithms.RAAR.RAAR method) (proxtoolbox.algorithms.algorithm.Algorithm method) getDescriptionHelper() (proxtoolbox.algorithms.algorithm.Algorithm method) getIterateSize() (proxtoolbox.algorithms.iterateMonitor.IterateMonitor method)

H

heaviside() (in module proxtoolbox.experiments.ptychography.ptychographyUtils) hessian_wrapper() (in module proxtoolbox.algorithms.samsara.hessian)

history_wrapper() (in module proxtoolbox.algorithms.samsara.history) HPR (class in proxtoolbox.algorithms.HPR)

I

IFFT() (in module proxtoolbox.utils) ifft() (in module proxtoolbox.utils.FFT) IFFT() (in module proxtoolbox.utils.IFFT) IFresnel2() (in module proxtoolbox.utils.IFresnel2) im2hsv() (in module proxtoolbox.experiments.ptychography.ptychographyUtils) initialize() (proxtoolbox.experiments.experiment.Experiment method) instanciateAlgorithm() (proxtoolbox.experiments.experiment.Experiment method) inv_tGammPhiTPhi_product2() (in module proxtoolbox.algorithms.samsara.step_finder)

invBFGS1_product() (in module proxtoolbox.algorithms.samsara.hessian) invBroyden1_product() (in module proxtoolbox.algorithms.samsara.hessian) invBroyden2_product() (in module proxtoolbox.algorithms.samsara.hessian) InvPropagator_FreFra (class in proxtoolbox.proxoperators.propagators) InvPropagatorFFT2 (class in proxtoolbox.proxoperators.propagators) InvPropagatorFFTn (class in proxtoolbox.proxoperators.propagators) is_empty() (in module proxtoolbox.algorithms.samsara.samsara) isCell() (in module proxtoolbox.utils.cell) IterateMonitor (class in proxtoolbox.algorithms.iterateMonitor)

J

JSONNumpyEncoder (class in proxtoolbox.experiments.experiment)

JWST_Experiment (class in proxtoolbox.experiments.phase.JWST_Experiment)

K

Krueger_Experiment (class in proxtoolbox.experiments.phase.Krueger_Experiment)

L

Laplace_matrix() (in module proxtoolbox.utils) (in module proxtoolbox.utils.Laplace_matrix) Laplacian() (in module proxtoolbox.utils.Laplacian) length() (in module proxtoolbox.utils.Unwrapper) loadData() (proxtoolbox.experiments.CT.ART_Experiment.ART_Experiment method) (proxtoolbox.experiments.experiment.Experiment method) (proxtoolbox.experiments.orbitaltomography.orbitExperiment.OrbitalTomographyExperiment method) (proxtoolbox.experiments.phase.CDI_Experiment.CDI_Experiment method) (proxtoolbox.experiments.phase.CDP_Experiment.CDP_Experiment method) (proxtoolbox.experiments.phase.JWST_Experiment.JWST_Experiment method) (proxtoolbox.experiments.phase.Krueger_Experiment.Krueger_Experiment method) (proxtoolbox.experiments.sudoku.sudokuExperiment.SudokuExperiment method)

M

magproj() (in module proxtoolbox.proxoperators.proxoperator) Memory_update() (in module proxtoolbox.algorithms.samsara.memory)

Mgen() (in module proxtoolbox.utils.Mgen) MgenN() (in module proxtoolbox.utils.MgenN) mypoissonrnd() (in module proxtoolbox.utils.mypoissonrnd)

N

nargout() (in module proxtoolbox.utils.dftregistration)

next_slice() (proxtoolbox.utils.visualization.stack_viewer.SingleStackViewer method) Normsqresid() (in module proxtoolbox.algorithms.samsara.samsara)

O

onAnimationWindowClosing() (proxtoolbox.experiments.experiment.Experiment method)

OnesPad() (in module proxtoolbox.utils.OnesPad2) OrbitalTomographyExperiment (class in proxtoolbox.experiments.orbitaltomography.orbitExperiment)

P

P_Amod (class in proxtoolbox.proxoperators.P_Amod) P_amp_support (class in proxtoolbox.proxoperators.P_amp_support) P_avg (class in proxtoolbox.proxoperators.P_avg) P_CDP (class in proxtoolbox.proxoperators.P_CDP) P_diag (class in proxtoolbox.proxoperators.P_diag) P_hyperplane (class in proxtoolbox.proxoperators.CT_prox) P_M (class in proxtoolbox.proxoperators.P_M) P_M_masked (class in proxtoolbox.proxoperators.P_M) P_ptychography_scan_farfield_probe (class in proxtoolbox.proxoperators.ptychographyProx) P_sequential_hyperplane_even (class in proxtoolbox.proxoperators.CT_prox) P_sequential_hyperplane_odd (class in proxtoolbox.proxoperators.CT_prox) P_SP (class in proxtoolbox.proxoperators.P_SP) P_Sparsity (class in proxtoolbox.proxoperators.P_Sparsity) P_Sparsity_real (class in proxtoolbox.proxoperators.P_Sparsity) P_Sparsity_Superpixel (class in proxtoolbox.proxoperators.P_Sparsity) P_Sparsity_Superpixel_real (class in proxtoolbox.proxoperators.P_Sparsity) P_Sparsity_Symmetric (class in proxtoolbox.proxoperators.P_Sparsity) P_Sparsity_Symmetric_real (class in proxtoolbox.proxoperators.P_Sparsity) P_supp_amp_band (class in proxtoolbox.proxoperators.ptychographyProx) pad_to_square() (in module proxtoolbox.utils.OrbitalTomog.padding) phase_offset_compensated_norm() (proxtoolbox.algorithms.algorithm.Algorithm static method) (proxtoolbox.algorithms.iterateMonitor.IterateMonitor static method) PhaseExperiment (class in proxtoolbox.experiments.phase.phaseExperiment) PHeBIE (class in proxtoolbox.algorithms.PHeBIE) PHeBIE_IterateMonitor (class in proxtoolbox.algorithms.PHeBIE_IterateMonitor) plot() (proxtoolbox.algorithms.samsara.samsara.Samsara method) PoissonRan() (in module proxtoolbox.utils) (in module proxtoolbox.utils.PoissonRan) postprocess() (proxtoolbox.algorithms.ADMM_IterateMonitor.ADMM_IterateMonitor method) (proxtoolbox.algorithms.AvP2_IterateMonitor.AvP2_IterateMonitor method) (proxtoolbox.algorithms.PHeBIE_IterateMonitor.PHeBIE_IterateMonitor method) (proxtoolbox.algorithms.algorithm.Algorithm method) (proxtoolbox.algorithms.feasibilityIterateMonitor.FeasibilityIterateMonitor method) (proxtoolbox.algorithms.iterateMonitor.IterateMonitor method) (proxtoolbox.experiments.experiment.Experiment method) (proxtoolbox.experiments.sudoku.sudokuExperiment.SudokuExperiment method) preprocess() (proxtoolbox.algorithms.ADMM_IterateMonitor.ADMM_IterateMonitor method) (proxtoolbox.algorithms.AvP2_IterateMonitor.AvP2_IterateMonitor method) (proxtoolbox.algorithms.PHeBIE_IterateMonitor.PHeBIE_IterateMonitor method) (proxtoolbox.algorithms.algorithm.Algorithm method) (proxtoolbox.algorithms.feasibilityIterateMonitor.FeasibilityIterateMonitor method) (proxtoolbox.algorithms.iterateMonitor.IterateMonitor method) previous_slice() (proxtoolbox.utils.visualization.stack_viewer.SingleStackViewer method) printBenchmark() (proxtoolbox.experiments.experiment.Experiment method) printInput() (proxtoolbox.experiments.experiment.Experiment method) process_key() (proxtoolbox.utils.visualization.stack_viewer.SingleStackViewer method) procrustes() (in module proxtoolbox.utils) (in module proxtoolbox.utils.Procrustes) ProjColumn (class in proxtoolbox.proxoperators.sudokuProx) ProjGiven (class in proxtoolbox.proxoperators.sudokuProx) ProjRow (class in proxtoolbox.proxoperators.sudokuProx) ProjSquare (class in proxtoolbox.proxoperators.sudokuProx) prop_nf_pa() (in module proxtoolbox.experiments.ptychography.ptychographyUtils) Propagator_FreFra (class in proxtoolbox.proxoperators.propagators) PropagatorFFT2 (class in proxtoolbox.proxoperators.propagators) PropagatorFFTn (class in proxtoolbox.proxoperators.propagators) Prox_primal_ADMM_indicator (class in proxtoolbox.proxoperators.ADMM_prox) Prox_product_space (class in proxtoolbox.proxoperators.Prox_product_space) Prox_ptychography_product_space (class in proxtoolbox.proxoperators.ptychographyProx) Prox_ptychography_ptwise_diag (class in proxtoolbox.proxoperators.ptychographyProx) ProxOperator (class in proxtoolbox.proxoperators.proxoperator) proxtoolbox (module), [1] proxtoolbox.algorithms (module) proxtoolbox.algorithms.ADMM (module) proxtoolbox.algorithms.ADMM_IterateMonitor (module) proxtoolbox.algorithms.ADMM_phase_indicator_objective (module) proxtoolbox.algorithms.ADMM_PhaseLagrangeUpdate (module) proxtoolbox.algorithms.algorithm (module) proxtoolbox.algorithms.AP (module) proxtoolbox.algorithms.AvP (module) proxtoolbox.algorithms.AvP2 (module) proxtoolbox.algorithms.AvP2_IterateMonitor (module) proxtoolbox.algorithms.CADRl (module) proxtoolbox.algorithms.CDRl (module) proxtoolbox.algorithms.CP (module) proxtoolbox.algorithms.CT_IterateMonitor (module) proxtoolbox.algorithms.DRAP (module) proxtoolbox.algorithms.DRl (module) proxtoolbox.algorithms.DyRePr (module) proxtoolbox.algorithms.feasibilityIterateMonitor (module) proxtoolbox.algorithms.GenericAccelerator (module)

proxtoolbox.algorithms.HPR (module) proxtoolbox.algorithms.iterateMonitor (module) proxtoolbox.algorithms.PHeBIE (module) proxtoolbox.algorithms.PHeBIE_IterateMonitor (module) proxtoolbox.algorithms.QNAccelerator (module) proxtoolbox.algorithms.QNAvP (module) proxtoolbox.algorithms.RAAR (module) proxtoolbox.algorithms.samsara (module) proxtoolbox.algorithms.samsara.hessian (module) proxtoolbox.algorithms.samsara.history (module) proxtoolbox.algorithms.samsara.memory (module) proxtoolbox.algorithms.samsara.samsara (module) proxtoolbox.algorithms.samsara.step_finder (module) proxtoolbox.experiments (module) proxtoolbox.experiments.CT (module) proxtoolbox.experiments.CT.ART_Experiment (module) proxtoolbox.experiments.experiment (module) proxtoolbox.experiments.orbitaltomography (module) proxtoolbox.experiments.orbitaltomography.orbitExperiment (module) proxtoolbox.experiments.phase (module) proxtoolbox.experiments.phase.CDI_Experiment (module) proxtoolbox.experiments.phase.CDP_Experiment (module) proxtoolbox.experiments.phase.JWST_Experiment (module) proxtoolbox.experiments.phase.Krueger_Experiment (module) proxtoolbox.experiments.phase.phaseExperiment (module) proxtoolbox.experiments.ptychography (module) proxtoolbox.experiments.ptychography.ptychographyUtils (module) proxtoolbox.experiments.sudoku (module) proxtoolbox.experiments.sudoku.sudokuExperiment (module) proxtoolbox.proxoperators (module) proxtoolbox.proxoperators.ADMM_prox (module) proxtoolbox.proxoperators.Approx_Pphase_FreFra_Poisson (module) proxtoolbox.proxoperators.CT_prox (module) proxtoolbox.proxoperators.P_Amod (module) proxtoolbox.proxoperators.P_amp_support (module) proxtoolbox.proxoperators.P_avg (module) proxtoolbox.proxoperators.P_CDP (module) proxtoolbox.proxoperators.P_diag (module) proxtoolbox.proxoperators.P_M (module) proxtoolbox.proxoperators.P_SP (module) proxtoolbox.proxoperators.P_Sparsity (module) proxtoolbox.proxoperators.propagators (module) proxtoolbox.proxoperators.Prox_product_space (module) proxtoolbox.proxoperators.proxoperator (module) proxtoolbox.proxoperators.ptychographyProx (module) proxtoolbox.proxoperators.sudokuProx (module) proxtoolbox.utils (module) proxtoolbox.utils.cell (module) proxtoolbox.utils.dftregistration (module) proxtoolbox.utils.Extracter (module) proxtoolbox.utils.FFT (module) proxtoolbox.utils.Flip (module) proxtoolbox.utils.gaussian (module) proxtoolbox.utils.GetData (module) proxtoolbox.utils.GetData.GetData (module) proxtoolbox.utils.IFFT (module) proxtoolbox.utils.IFresnel2 (module) proxtoolbox.utils.Laplace_matrix (module) proxtoolbox.utils.Laplacian (module) proxtoolbox.utils.Mgen (module) proxtoolbox.utils.MgenN (module) proxtoolbox.utils.mypoissonrnd (module) proxtoolbox.utils.OnesPad2 (module) proxtoolbox.utils.OrbitalTomog (module) proxtoolbox.utils.OrbitalTomog.array_tools (module) proxtoolbox.utils.OrbitalTomog.binning (module) proxtoolbox.utils.OrbitalTomog.interpolation (module) proxtoolbox.utils.OrbitalTomog.padding (module) proxtoolbox.utils.PoissonRan (module) proxtoolbox.utils.Procrustes (module) proxtoolbox.utils.RANDsrc (module) proxtoolbox.utils.Rbin (module) proxtoolbox.utils.Reorder (module) proxtoolbox.utils.Resize (module) proxtoolbox.utils.size (module) proxtoolbox.utils.Unwrapper (module) proxtoolbox.utils.visualization (module) proxtoolbox.utils.visualization.complex_field_visualization (module) proxtoolbox.utils.visualization.stack_viewer (module) proxtoolbox.utils.Wbin (module) proxtoolbox.utils.ZeroPad (module)

Q

QNAccelerator (class in proxtoolbox.algorithms.QNAccelerator) QNAvP (class in proxtoolbox.algorithms.QNAvP)

query_yes_no() (in module proxtoolbox.utils.GetData) (in module proxtoolbox.utils.GetData.GetData)

R

RAAR (class in proxtoolbox.algorithms.RAAR) ran_seed() (in module proxtoolbox.utils.Mgen) (in module proxtoolbox.utils.MgenN) rand() (in module proxtoolbox.experiments.phase.JWST_Experiment) (in module proxtoolbox.utils.FFT) (in module proxtoolbox.utils.IFFT) (in module proxtoolbox.utils.Mgen) (in module proxtoolbox.utils.PoissonRan) (in module proxtoolbox.utils.RANDsrc) (in module proxtoolbox.utils.Resize) randn() (in module proxtoolbox.experiments.phase.CDP_Experiment) (in module proxtoolbox.utils.MgenN) random() (in module proxtoolbox.algorithms.samsara.hessian) random_sample() (in module proxtoolbox.experiments.phase.CDP_Experiment)

RANDsrc() (in module proxtoolbox.utils.RANDsrc) Rbin() (in module proxtoolbox.utils.Rbin) Reorder() (in module proxtoolbox.utils.Reorder) reshapeData() (proxtoolbox.experiments.experiment.Experiment method) (proxtoolbox.experiments.orbitaltomography.orbitExperiment.OrbitalTomographyExperiment method) (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method) Resize() (in module proxtoolbox.utils) (in module proxtoolbox.utils.Resize) retrieveProxOperatorClasses() (proxtoolbox.experiments.experiment.Experiment method) roll_to_pos() (in module proxtoolbox.utils.OrbitalTomog.array_tools) run() (proxtoolbox.algorithms.algorithm.Algorithm method) (proxtoolbox.algorithms.samsara.samsara.Samsara method) (proxtoolbox.experiments.experiment.Experiment method) runAlgorithm() (proxtoolbox.experiments.experiment.Experiment method)

S

Samsara (class in proxtoolbox.algorithms.samsara.samsara) save() (proxtoolbox.algorithms.samsara.samsara.Samsara method) saveOutput() (proxtoolbox.experiments.experiment.Experiment method) scaler_wrapper() (in module proxtoolbox.algorithms.samsara.hessian) seed() (in module proxtoolbox.algorithms.samsara.hessian) set_cast_fn() (proxtoolbox.utils.visualization.stack_viewer.XYZStackViewer method) setFattening() (proxtoolbox.experiments.CT.ART_Experiment.ART_Experiment method) (proxtoolbox.experiments.experiment.Experiment method) setupProxOperators() (proxtoolbox.experiments.CT.ART_Experiment.ART_Experiment method) (proxtoolbox.experiments.experiment.Experiment method) (proxtoolbox.experiments.orbitaltomography.orbitExperiment.OrbitalTomographyExperiment method) (proxtoolbox.experiments.phase.CDI_Experiment.CDI_Experiment method) (proxtoolbox.experiments.phase.CDP_Experiment.CDP_Experiment method) (proxtoolbox.experiments.phase.JWST_Experiment.JWST_Experiment method) (proxtoolbox.experiments.phase.Krueger_Experiment.Krueger_Experiment method) (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method) (proxtoolbox.experiments.sudoku.sudokuExperiment.SudokuExperiment method) shift_array() (in module proxtoolbox.utils.OrbitalTomog.array_tools)

shifted_fft() (in module proxtoolbox.utils.OrbitalTomog.array_tools) shifted_ifft() (in module proxtoolbox.utils.OrbitalTomog.array_tools) show() (proxtoolbox.experiments.CT.ART_Experiment.ART_Experiment method) (proxtoolbox.experiments.experiment.Experiment method) (proxtoolbox.experiments.orbitaltomography.orbitExperiment.OrbitalTomographyExperiment method) (proxtoolbox.experiments.phase.CDI_Experiment.CDI_Experiment method) (proxtoolbox.experiments.phase.JWST_Experiment.JWST_Experiment method) (proxtoolbox.experiments.phase.Krueger_Experiment.Krueger_Experiment method) (proxtoolbox.experiments.phase.phaseExperiment.PhaseExperiment method) (proxtoolbox.experiments.sudoku.sudokuExperiment.SudokuExperiment method) SingleStackViewer (class in proxtoolbox.utils.visualization.stack_viewer) size_matlab() (in module proxtoolbox.utils.size) Step_generator() (in module proxtoolbox.algorithms.samsara.step_finder) Step_length_update() (in module proxtoolbox.algorithms.samsara.step_finder) step_wrapper() (in module proxtoolbox.algorithms.samsara.step_finder) stoppingCondition() (proxtoolbox.algorithms.algorithm.Algorithm method) SudokuExperiment (class in proxtoolbox.experiments.sudoku.sudokuExperiment) SudokuProx (class in proxtoolbox.proxoperators.sudokuProx)

T

tile_array() (in module proxtoolbox.utils.OrbitalTomog.array_tools)

transformVectors() (in module proxtoolbox.utils.FFT) TRBFGS1() (in module proxtoolbox.algorithms.samsara.step_finder)

U

Unwrapper() (in module proxtoolbox.utils.Unwrapper) update_1() (proxtoolbox.utils.visualization.stack_viewer.XYZStackViewer method) update_2() (proxtoolbox.utils.visualization.stack_viewer.XYZStackViewer method) update_3() (proxtoolbox.utils.visualization.stack_viewer.XYZStackViewer method) updateStatistics() (proxtoolbox.algorithms.ADMM_IterateMonitor.ADMM_IterateMonitor method) (proxtoolbox.algorithms.AvP2_IterateMonitor.AvP2_IterateMonitor method) (proxtoolbox.algorithms.PHeBIE_IterateMonitor.PHeBIE_IterateMonitor method) (proxtoolbox.algorithms.algorithm.Algorithm method) (proxtoolbox.algorithms.feasibilityIterateMonitor.FeasibilityIterateMonitor method) (proxtoolbox.algorithms.iterateMonitor.IterateMonitor method)

W

Wbin() (in module proxtoolbox.utils.Wbin)

X

XYZStackViewer (class in proxtoolbox.utils.visualization.stack_viewer)

Z

ZeroPad() (in module proxtoolbox.utils) (in module proxtoolbox.utils.ZeroPad)